Tuberculosis Primary care

Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou

PH818 / 1715 Clinical-Coded Phenotype

  1. Overview

    Phenotype Type
    Disease or syndrome
    Sex
    Both
    Valid Event Date Range
    01/01/2001 to 31/01/2021
    Coding System
    Read codes v2SNOMED CT codes
    Data Sources
    Hospital Episode Statistics Admitted Patient Care
    CPRD GOLD
    CPRD Aurum
    UK Biobank
    Office of National Statistics (ONS)
    Office of National Statistics (ONS)
    Collections
    BREATHEPhenotype Library
    Tags
    No data
    Ontology
    No data

  2. Definition

    • Not found code search
    • No validation available

  3. Implementation

    Implementation

    According to NHS, tuberculosis is a bacterial infection spread through inhaling tiny droplets from the coughs or sneezes of an infected person. It mainly affects the lungs, but it can affect any part of the body, including the tummy (abdomen), glands, bones and nervous system.

    https://www.nhs.uk/conditions/tuberculosis-tb/

    Not found code search

  4. Clinical Code List

  5. Publication

    Related publications

    • No publications idenified via Pubmed in the last 12 months

    Citation Example

    Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou. PH818 / 1715 - Tuberculosis Primary care. Phenotype Library [Online]. 21 January 2022. Available from: http://phenotypes.healthdatagateway.org/phenotypes/PH818/version/1715/detail/. [Accessed 05 February 2025]

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH818/version/1715/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH818',
     version_id=1715
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_detail(
     'PH818',
     version_id=1715
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH818/version/1715/export/codes/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH818',
     version_id=1715
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH818',
     version_id=1715
    )

  7. Version History

    Version IDNameOwnerPublish date
    2252 Tuberculosis Primary care zinnurar2022-08-09 09:50
    Tuberculosis Primary care zinnurar2022-01-21 08:11