Tuberculosis Primary care
Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou
PH818 / 1715 Clinical-Coded Phenotype
Overview
Phenotype TypeDisease or syndromePhenotype UUIDexcel-breathe-idOCK5XSexBothValid Event Date Range01/01/2001 to 31/01/2021Coding SystemRead codes v2SNOMED CT codesData SourcesHospital Episode Statistics Admitted Patient Care, UK Biobank, CPRD Aurum, Office of National Statistics (ONS), CPRD GOLDCollectionsBREATHEPhenotype LibraryTagsNo dataDefinition
- Not found code search
- No validation available
Implementation
Implementation
According to NHS, tuberculosis is a bacterial infection spread through inhaling tiny droplets from the coughs or sneezes of an infected person. It mainly affects the lungs, but it can affect any part of the body, including the tummy (abdomen), glands, bones and nervous system.
https://www.nhs.uk/conditions/tuberculosis-tb/
Not found code search
Clinical Code List
PUBLISHED - 44 Codes
PUBLISHED - 68 Codes
PUBLISHED - 44 Codes
PUBLISHED - 68 Codes
Publication
No publications idenified via Pubmed in the last 12 months
Citation Example
Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou. PH818 / 1715 - Tuberculosis Primary care. Phenotype Library [Online]. 21 January 2022. Available from: http://phenotypes.healthdatagateway.org/phenotypes/PH818/version/1715/detail/. [Accessed 26 April 2024]
API
To Export Phenotype Details:
Format API JSON site_root/api/v1/phenotypes/PH818/version/1715/detail/?format=json R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get details of phenotype
phenotype_details = client$phenotypes$get_detail(
'PH818',
version_id=1715
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_detail(
'PH818',
version_id=1715
)To Export Phenotype Code List:
Format API JSON site_root/api/v1/phenotypes/PH818/version/1715/export/codes/?format=json CSV site_root/phenotypes/PH818/version/1715/export/codes/ R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get codelist of phenotype
phenotype_codelist = client$phenotypes$get_codelist(
'PH818',
version_id=1715
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_codelist(
'PH818',
version_id=1715
)Version History