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Contact with Mental Health Services

Rebecca M Joseph, Ruth H Jack, Richard Morriss, Roger David Knaggs, Debbie Buttler, Chris Hollis, Julia Hippisley-Cox, Carrol Coupland

Type
Disease or Syndrome
ID
PH864
Version ID
1807
Data Sources
Valid event data range
01/01/2005 - 30/11/2018
Sex
Female, Male
Agreement Date
2022-02-02
Coding system
Read codes v2
Tags /Collections
ClinicalCodes Repository Phenotype Library

Definition

Background:

Studies have reported an increased risk of mortality among people prescribed mirtazapine compared to other antidepressants. The study aimed to compare all-cause and cause-specific mortality between adults prescribed mirtazapine or other second-line antidepressants.

Methods:

This cohort study used English primary care electronic medical records, hospital admission records, and mortality data from the Clinical Practice Research Datalink (CPRD), for the period 01 January 2005 to 30 November 2018. It included people aged 18–99 years with depression first prescribed a selective serotonin reuptake inhibitor (SSRI) and then prescribed mirtazapine (5081), a different SSRI (15,032), amitriptyline (3905), or venlafaxine (1580). Follow-up was from starting to stopping the second antidepressant, with a 6-month wash-out window, censoring at the end of CPRD follow-up or 30 November 2018. Age-sex standardised rates of all-cause mortality and death due to circulatory system disease, cancer, or respiratory system disease were calculated. Survival analyses were performed, accounting for baseline characteristics using inverse probability of treatment weighting.

Results:

The cohort contained 25,598 people (median age 41 years). The mirtazapine group had the highest standardised mortality rate, with an additional 7.8 (95% confidence interval (CI) 5.9–9.7) deaths/1000 person-years compared to the SSRI group. Within 2 years of follow-up, the risk of all-cause mortality was statistically significantly higher in the mirtazapine group than in the SSRI group (weighted hazard ratio (HR) 1.62, 95% CI 1.28–2.06). No significant difference was found between the mirtazapine group and the amitriptyline (HR 1.18, 95% CI 0.85–1.63) or venlafaxine (HR 1.11, 95% CI 0.60–2.05) groups. After 2 years, the risk was significantly higher in the mirtazapine group compared to the SSRI (HR 1.51, 95% CI 1.04–2.19), amitriptyline (HR 2.59, 95% CI 1.38–4.86), and venlafaxine (HR 2.35, 95% CI 1.02–5.44) groups. The risks of death due to cancer (HR 1.74, 95% CI 1.06–2.85) and respiratory system disease (HR 1.72, 95% CI 1.07–2.77) were significantly higher in the mirtazapine than in the SSRI group.

Conclusions:

Mortality was higher in people prescribed mirtazapine than people prescribed a second SSRI, possibly reflecting residual differences in other risk factors between the groups. Identifying these potential health risks when prescribing mirtazapine may help reduce the risk of mortality.

Publications

  • Rebecca M Joseph, Ruth H Jack, Richard Morriss, Roger David Knaggs, Debbie Buttler, Chris Hollis, Julia Hippisley-Cox, Carrol Coupland, The risk of all-cause and cause-specific mortality in people prescribed mirtazapine an active comparator cohort study using electronic health records. BMC Medicine, 20(43), 2022.

Clinical Code List

Rows: 233
Code Description Entity type Category Coding System (Read)
64R6.00 child: school psychol. service res176: Contact with mental health services diagnostic Read
64R6.11 child referral-school psychol. res176: Contact with mental health services diagnostic Read
64R7.00 child: clinical psychologist res176: Contact with mental health services diagnostic Read
64R7.11 child refer- clinical psychol. res176: Contact with mental health services diagnostic Read
6779 psychological counselling res176: Contact with mental health services diagnostic Read
677A.00 psychosexual counselling res176: Contact with mental health services diagnostic Read
67X..00 psychoeducation res176: Contact with mental health services diagnostic Read
69F..00 mental health act examination res176: Contact with mental health services diagnostic Read
69FZ.00 mental health act exam nos res176: Contact with mental health services diagnostic Read
7P22.00 rehabilitation for psychiatric disorders res176: Contact with mental health services diagnostic Read
7P22y00 other specified rehabilitation for psychiatric disorders res176: Contact with mental health services diagnostic Read
7P22z00 rehabilitation for psychiatric disorders nos res176: Contact with mental health services diagnostic Read
8A2..00 psychiatric monitoring res176: Contact with mental health services diagnostic Read
8A21.00 psychiatric observation res176: Contact with mental health services diagnostic Read
8A2Z.00 psychiatric monitoring nos res176: Contact with mental health services diagnostic Read
8CM2.00 psychiatry care plan res176: Contact with mental health services diagnostic Read
8CM9.00 mental health care programme approach contingency plan res176: Contact with mental health services diagnostic Read
8CM9.11 mental health cpa contingency plan available res176: Contact with mental health services diagnostic Read
8CQ..00 mental health crisis plan res176: Contact with mental health services diagnostic Read
8CQ0.00 completion of mental health crisis plan res176: Contact with mental health services diagnostic Read
8CQ1.00 mental health care programme approach crisis plan res176: Contact with mental health services diagnostic Read
8CV3.00 psychological therapy started res176: Contact with mental health services diagnostic Read
8CY..00 mental health care programme approach res176: Contact with mental health services diagnostic Read
8Ce7.00 preferred place of care - mental health unit res176: Contact with mental health services diagnostic Read
8G10.00 psychotherapy - behavioural res176: Contact with mental health services diagnostic Read
8G11.00 psychotherapy - cognitive res176: Contact with mental health services diagnostic Read
8G12.00 psychotherapy - psychodynamic res176: Contact with mental health services diagnostic Read
8G12000 short-term psychodynamic therapy res176: Contact with mental health services diagnostic Read
8G13100 cbtp - cognitive behavioural therapy for psychosis res176: Contact with mental health services diagnostic Read
8G16.00 interpersonal psychotherapy res176: Contact with mental health services diagnostic Read
8G51.00 group psychotherapy res176: Contact with mental health services diagnostic Read
8GA..00 psychological nursing res176: Contact with mental health services diagnostic Read
8GG..00 systemic psychotherapy res176: Contact with mental health services diagnostic Read
8GH..00 child psychotherapy res176: Contact with mental health services diagnostic Read
8H23.00 admit psychiatric emergency res176: Contact with mental health services diagnostic Read
8H23000 emerg psychiatric admiss mha res176: Contact with mental health services diagnostic Read
8H2L.00 admit psychogeriatric emergency res176: Contact with mental health services diagnostic Read
8H2T.00 emergency voluntary psychiatric admission mental health act res176: Contact with mental health services diagnostic Read
8H34.00 psychiatric day care res176: Contact with mental health services diagnostic Read
8H38.00 non-urgent psychiatric admisn. res176: Contact with mental health services diagnostic Read
8H3Q.00 non-urgent psychogeriatric admission res176: Contact with mental health services diagnostic Read
8H49.00 psychiatric referral res176: Contact with mental health services diagnostic Read
8H4D.00 referral to psychogeriatrician res176: Contact with mental health services diagnostic Read
8H4P.00 referral to child psychiatrist res176: Contact with mental health services diagnostic Read
8H4f.00 referral to learning disabilities psychiatrist res176: Contact with mental health services diagnostic Read
8H7A.00 refer to mental health worker res176: Contact with mental health services diagnostic Read
8H7B.00 refer to community psych.nurse res176: Contact with mental health services diagnostic Read
8H7T.00 refer to psychologist res176: Contact with mental health services diagnostic Read
8HB8.00 mental therapy follow-up res176: Contact with mental health services diagnostic Read
8HBK.00 mental health triage nurse follow up res176: Contact with mental health services diagnostic Read
8HHR.00 referral to child and adolescent psychiatry service res176: Contact with mental health services diagnostic Read
8HHT.00 referral to psychotherapist res176: Contact with mental health services diagnostic Read
8HHn.00 referral to non nhs mental health community service res176: Contact with mental health services diagnostic Read
8HHo.00 referral to older age community mental health team res176: Contact with mental health services diagnostic Read
8HHr.00 referral for mental health self-help literature res176: Contact with mental health services diagnostic Read
8HHs.00 referral to psychosis early intervention service res176: Contact with mental health services diagnostic Read
8HHu.00 referral to primary care mental health gateway worker res176: Contact with mental health services diagnostic Read
8HHv.00 referral to primary care mental health graduate worker res176: Contact with mental health services diagnostic Read
8HJ3.00 psychiatric self-referral res176: Contact with mental health services diagnostic Read
8HK9.00 psychiatric d.v. requested res176: Contact with mental health services diagnostic Read
8HKC.00 psychogeriatrics d.v. requestd res176: Contact with mental health services diagnostic Read
8HL9.00 psychiatry d.v. done res176: Contact with mental health services diagnostic Read
8HLC.00 psychogeriatric d.v. done res176: Contact with mental health services diagnostic Read
8HM9.00 listed for psychiatric admissn res176: Contact with mental health services diagnostic Read
8HMC.00 listed for psychogeriatr admis res176: Contact with mental health services diagnostic Read
8HTc.00 referral to psychosexual clinic res176: Contact with mental health services diagnostic Read
8HVO.00 private referral to psychiatrist res176: Contact with mental health services diagnostic Read
8HVS.00 private referral to psychogeriatrician res176: Contact with mental health services diagnostic Read
8HVi.00 private referral to psychologist res176: Contact with mental health services diagnostic Read
8Hc..00 referral to mental health team res176: Contact with mental health services diagnostic Read
8Hc0.00 referral to community mental health team res176: Contact with mental health services diagnostic Read
8Hc1.00 referral to mental health crisis team res176: Contact with mental health services diagnostic Read
8Hc2.00 referral to primary care mental health team res176: Contact with mental health services diagnostic Read
8Hg7.00 discharged from care of mental health triage nurse res176: Contact with mental health services diagnostic Read
8Hg9.00 discharged from community mental health service res176: Contact with mental health services diagnostic Read
8HgB.00 discharged by mental health primary care worker res176: Contact with mental health services diagnostic Read
8HgY.00 discharge from child and adolescent mental health service res176: Contact with mental health services diagnostic Read
8Hj2.00 referral to psycho-educational group res176: Contact with mental health services diagnostic Read
8HkK.00 referral to improving access to psychological therapies prog res176: Contact with mental health services diagnostic Read
8Hl9.00 referral to educational psychologist res176: Contact with mental health services diagnostic Read
8HlB.00 urgent referral to psychiatrist res176: Contact with mental health services diagnostic Read
8HlD.00 referral to forensic psychiatrist res176: Contact with mental health services diagnostic Read
8T21.00 referral for mental health assessment res176: Contact with mental health services diagnostic Read
9239 fp22-in mental hospital res176: Contact with mental health services diagnostic Read
9N0B.00 seen in psychogeriatric clinic res176: Contact with mental health services diagnostic Read
9N0T.00 seen in child psychology clinic res176: Contact with mental health services diagnostic Read
9N1H.00 seen in elderly mentaly infirm home res176: Contact with mental health services diagnostic Read
9N1M.00 seen in psychology clinic res176: Contact with mental health services diagnostic Read
9N1T.00 seen in psychiatry clinic res176: Contact with mental health services diagnostic Read
9N1yA00 seen in psychogeriatric clinic res176: Contact with mental health services diagnostic Read
9N2E200 seen by core psychiatry trainee doctor res176: Contact with mental health services diagnostic Read
9N2W.00 seen by psychologist res176: Contact with mental health services diagnostic Read
9N2W000 seen by assistant psychologist res176: Contact with mental health services diagnostic Read
9N2W100 seen by forensic psychologist res176: Contact with mental health services diagnostic Read
9N2W200 seen by child and adolescent psychologist res176: Contact with mental health services diagnostic Read
9N2W300 seen by trainee psychologist res176: Contact with mental health services diagnostic Read
9N2a.00 seen by community psychiatric nurse res176: Contact with mental health services diagnostic Read
9N2q.00 seen by primary care graduate mental health worker res176: Contact with mental health services diagnostic Read
9N2r.00 seen by mental health triage nurse res176: Contact with mental health services diagnostic Read
9N2v.00 seen by primary care mental health gateway worker res176: Contact with mental health services diagnostic Read
9N2z.00 seen by child and adolescent mental health service res176: Contact with mental health services diagnostic Read
9N5F.00 patient initiated encounter with mental health crisis team res176: Contact with mental health services diagnostic Read
9N5G400 111 contact disposition to mental health service res176: Contact with mental health services diagnostic Read
9N6h.00 referral by mental health service res176: Contact with mental health services diagnostic Read
9NI6.00 psychiatric outreach clinic res176: Contact with mental health services diagnostic Read
9NJb.00 in-house psychiatry first appointment res176: Contact with mental health services diagnostic Read
9NJc.00 in-house psychiatry discharge res176: Contact with mental health services diagnostic Read
9NJd.00 in-house psychiatry follow-up appointment res176: Contact with mental health services diagnostic Read
9NN4.00 has community mental health team key worker res176: Contact with mental health services diagnostic Read
9NN5.00 under care of psychiatrist res176: Contact with mental health services diagnostic Read
9NN7.00 under care of mental health team res176: Contact with mental health services diagnostic Read
9NN7000 under care of mental health in-reach team res176: Contact with mental health services diagnostic Read
9NNE.00 under the care of psychologist res176: Contact with mental health services diagnostic Read
9NNE000 under care of educational psychologist res176: Contact with mental health services diagnostic Read
9NNM.00 under care of community psychiatric nurse res176: Contact with mental health services diagnostic Read
9NNQ.00 under care of hospital psychiatric team res176: Contact with mental health services diagnostic Read
9NS1.00 attended psycho-educational group res176: Contact with mental health services diagnostic Read
9NSA.00 unsuitable for biopsychosocial assessment res176: Contact with mental health services diagnostic Read
9NSC.00 accepted by psychological talking therapy service res176: Contact with mental health services diagnostic Read
9Ng6.00 independent mental capacity advocate instructed res176: Contact with mental health services diagnostic Read
9Nk6.00 seen in mental health clinic res176: Contact with mental health services diagnostic Read
9NlG.00 seen by forensic psychiatrist res176: Contact with mental health services diagnostic Read
9NlK.00 seen by psychotherapist res176: Contact with mental health services diagnostic Read
9NlK000 seen by trainee psychotherapist res176: Contact with mental health services diagnostic Read
9Nla.00 seen by psychiatrist res176: Contact with mental health services diagnostic Read
9Nla000 seen by child and adolescent psychiatrist res176: Contact with mental health services diagnostic Read
9Nla100 seen by consultant psychiatrist res176: Contact with mental health services diagnostic Read
9No0.00 seen in child and adolescent psychiatry clinic res176: Contact with mental health services diagnostic Read
9bA..00 psychiatry res176: Contact with mental health services diagnostic Read
9bA0.00 mental handicap (specialty) res176: Contact with mental health services diagnostic Read
9bA1.00 mental illness (specialty) res176: Contact with mental health services diagnostic Read
9bA2.00 child and adolescent psychiatry res176: Contact with mental health services diagnostic Read
9bA3.00 forensic psychiatry res176: Contact with mental health services diagnostic Read
9bA4.00 psychotherapy (specialty) res176: Contact with mental health services diagnostic Read
9bA5.00 old age psychiatry res176: Contact with mental health services diagnostic Read
Z522.00 behavioural psychotherapy res176: Contact with mental health services diagnostic Read
Z571.00 systemic family psychotherapy res176: Contact with mental health services diagnostic Read
Z572.00 strategic family psychotherapy res176: Contact with mental health services diagnostic Read
Z573.00 structural family psychotherapy res176: Contact with mental health services diagnostic Read
Z574.00 narrative family psychotherapy res176: Contact with mental health services diagnostic Read
Z576.00 psychosexual therapy res176: Contact with mental health services diagnostic Read
Z576100 generic psychosexual therapy res176: Contact with mental health services diagnostic Read
Z576200 relationship orientated psychosexual therapy res176: Contact with mental health services diagnostic Read
Z5A..00 psychoanalytic and psychodynamic therapy res176: Contact with mental health services diagnostic Read
Z5A..11 psychoanalytical - psychodynamic therapy res176: Contact with mental health services diagnostic Read
Z5A3.00 psychodynamic psychotherapy res176: Contact with mental health services diagnostic Read
Z5A3100 long-term psychodynamic psychotherapy res176: Contact with mental health services diagnostic Read
Z5A3400 psychodynamic-interpersonal psychotherapy res176: Contact with mental health services diagnostic Read
Z5A4.00 brief focal psychodynamic therapy res176: Contact with mental health services diagnostic Read
Z5A5.00 group psychotherapy res176: Contact with mental health services diagnostic Read
Z5A5100 group analytic psychotherapy res176: Contact with mental health services diagnostic Read
Z5A6200 child-based psychoanalytic psychotherapy res176: Contact with mental health services diagnostic Read
Z5C1.00 day psychotherapy programme res176: Contact with mental health services diagnostic Read
Z922.00 care planning under section 117 of mental health act 1983 res176: Contact with mental health services diagnostic Read
ZL1B.00 under care of psychiatrist res176: Contact with mental health services diagnostic Read
ZL1B100 under care of child and adolescent psychiatrist res176: Contact with mental health services diagnostic Read
ZL1B200 under care of forensic psychiatrist res176: Contact with mental health services diagnostic Read
ZL1B300 under care of liaison psychiatrist res176: Contact with mental health services diagnostic Read
ZL1B400 under care of psychogeriatrician res176: Contact with mental health services diagnostic Read
ZL1B411 under care of elderly mentally ill psychiatrist res176: Contact with mental health services diagnostic Read
ZL1B412 under care of old age psychiatrist res176: Contact with mental health services diagnostic Read
ZL1B500 under care of psychiatrist for mental handicap res176: Contact with mental health services diagnostic Read
ZL1B600 under care of rehabilitation psychiatrist res176: Contact with mental health services diagnostic Read
ZL22B00 under care of nurse psychotherapist res176: Contact with mental health services diagnostic Read
ZL22E00 under care of psychiatric nurse res176: Contact with mental health services diagnostic Read
ZL23100 under care of community psychiatric nurse res176: Contact with mental health services diagnostic Read
ZL31400 under care of mental health counsellor res176: Contact with mental health services diagnostic Read
ZL34.00 under care of psychotherapist res176: Contact with mental health services diagnostic Read
ZL5B.00 referral to psychiatrist res176: Contact with mental health services diagnostic Read
ZL5B100 referral to child and adolescent psychiatrist res176: Contact with mental health services diagnostic Read
ZL5B111 referral to child psychiatrist res176: Contact with mental health services diagnostic Read
ZL5B200 referral to forensic psychiatrist res176: Contact with mental health services diagnostic Read
ZL5B300 referral to liaison psychiatrist res176: Contact with mental health services diagnostic Read
ZL5B400 referral to rehabilitation psychiatrist res176: Contact with mental health services diagnostic Read
ZL5B500 referral to psychiatrist for mental handicap res176: Contact with mental health services diagnostic Read
ZL62B00 referral to nurse psychotherapist res176: Contact with mental health services diagnostic Read
ZL62E00 referral to psychiatric nurse res176: Contact with mental health services diagnostic Read
ZL73400 referral to mental health counsellor res176: Contact with mental health services diagnostic Read
ZL77.00 referral to psychotherapist res176: Contact with mental health services diagnostic Read
ZL78.00 referral to psychologist res176: Contact with mental health services diagnostic Read
ZL78.11 refer to psychologist res176: Contact with mental health services diagnostic Read
ZL9D.00 seen by psychiatrist res176: Contact with mental health services diagnostic Read
ZL9D100 seen by child and adolescent psychiatrist res176: Contact with mental health services diagnostic Read
ZL9D200 seen by forensic psychiatrist res176: Contact with mental health services diagnostic Read
ZL9D300 seen by liaison psychiatrist res176: Contact with mental health services diagnostic Read
ZL9D400 seen by psychogeriatrician res176: Contact with mental health services diagnostic Read
ZL9D411 seen by psychiatrist for the elderly mentally ill res176: Contact with mental health services diagnostic Read
ZL9D412 seen by old age psychiatrist res176: Contact with mental health services diagnostic Read
ZL9D500 seen by psychiatrist for mental handicap res176: Contact with mental health services diagnostic Read
ZL9D600 seen by rehabilitation psychiatrist res176: Contact with mental health services diagnostic Read
ZLA2B00 seen by nurse psychotherapist res176: Contact with mental health services diagnostic Read
ZLA2E00 seen by psychiatric nurse res176: Contact with mental health services diagnostic Read
ZLA3100 seen by community psychiatric nurse res176: Contact with mental health services diagnostic Read
ZLB5.00 seen by mental health counsellor res176: Contact with mental health services diagnostic Read
ZLBB.00 seen by psychologist res176: Contact with mental health services diagnostic Read
ZLBC.00 seen by psychotherapist res176: Contact with mental health services diagnostic Read
ZLD1400 discharge by mental health counsellor res176: Contact with mental health services diagnostic Read
ZLD2a00 discharge by psychiatrist res176: Contact with mental health services diagnostic Read
ZLD2b00 discharge by child and adolescent psychiatrist res176: Contact with mental health services diagnostic Read
ZLD2c00 discharge by forensic psychiatrist res176: Contact with mental health services diagnostic Read
ZLD2d00 discharge by liaison psychiatrist res176: Contact with mental health services diagnostic Read
ZLD2e00 discharge by psychogeriatrician res176: Contact with mental health services diagnostic Read
ZLD2e11 discharge by old age psychiatrist res176: Contact with mental health services diagnostic Read
ZLD2e12 discharge by psychiatrist for the elderly mentally ill res176: Contact with mental health services diagnostic Read
ZLD2f00 discharge by psychiatrist for mental handicap res176: Contact with mental health services diagnostic Read
ZLD2g00 discharge by rehabilitation psychiatrist res176: Contact with mental health services diagnostic Read
ZLD7900 discharge by nurse psychotherapist res176: Contact with mental health services diagnostic Read
ZLD7C00 discharge by psychiatric nurse res176: Contact with mental health services diagnostic Read
ZLD8100 discharge by community psychiatric nurse res176: Contact with mental health services diagnostic Read
ZLDA.00 discharge by educational psychologist res176: Contact with mental health services diagnostic Read
ZLDB.00 discharge by psychotherapist res176: Contact with mental health services diagnostic Read
ZLE9.00 discharge from psychiatry service res176: Contact with mental health services diagnostic Read
ZLE9100 discharge from child and adolescent psychiatry service res176: Contact with mental health services diagnostic Read
ZLE9200 discharge from forensic psychiatry service res176: Contact with mental health services diagnostic Read
ZLE9300 discharge from liaison psychiatry service res176: Contact with mental health services diagnostic Read
ZLE9400 discharge from mental handicap psychiatry service res176: Contact with mental health services diagnostic Read
ZLE9500 discharge from psychogeriatrician service res176: Contact with mental health services diagnostic Read
ZLE9511 discharge from old age psychiatry service res176: Contact with mental health services diagnostic Read
ZLE9512 discharge from elderly mentally ill service res176: Contact with mental health services diagnostic Read
ZLE9600 discharge from rehabilitation psychiatry service res176: Contact with mental health services diagnostic Read
ZLED.00 discharge from psychotherapy service res176: Contact with mental health services diagnostic Read
ZLF2200 discharge from psychiatry day hospital res176: Contact with mental health services diagnostic Read
ZLF2300 discharge from psychogeriatric day hospital res176: Contact with mental health services diagnostic Read
ZLF2311 discharge from old age psychiatry day hospital res176: Contact with mental health services diagnostic Read
ZLF2312 discharge from elderly mentally ill day hospital res176: Contact with mental health services diagnostic Read
ZV66300 [v]convalescence after psychotherapy or mental dis treatment res176: Contact with mental health services diagnostic Read
ZV67300 [v]psychotherapy/other treatment-mental disorder follow-up res176: Contact with mental health services diagnostic Read
ZV69.00 [v]psychiatric paitient admission details res176: Contact with mental health services diagnostic Read
ZV69000 [v]psychiatric patient - not previously admitted res176: Contact with mental health services diagnostic Read
ZV69100 [v]psych patient - prev admitted this health care provider res176: Contact with mental health services diagnostic Read
ZV69111 [v]psychiatric patient - previous admission this district res176: Contact with mental health services diagnostic Read
ZV69200 [v]psych patient - prev admitted other health care provider res176: Contact with mental health services diagnostic Read
ZV69211 [v]psychiatric patient - previously admitted other district res176: Contact with mental health services diagnostic Read

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH864/version/1807/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH864/version/1807/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH864', '1807', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH864/version/1807/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH864/version/1807/export/codes/?format=json
CSV site_root/phenotypes/PH864/version/1807/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH864', '1807', api_client=client)

Version History

Version
ID
Name Owner Publish date
1807 Contact with Mental Health Services ieuan.scanlon 2022-04-04 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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