Phenotype Library | phenotype: Actinic keratosis

Actinic keratosis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH92

Version ID

184

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Actinic keratosis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

'Actinic keratosis' diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

ALL diagnoses of 'Actinic keratosis' or history of diagnosis during a hospitalization

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/271

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

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C939/3017 Actinic keratosis - Primary care - Read codes v2

Rows: 4

Code	Description	Disease	Medcode	Category
7G09800	Cryotherapy to actinic keratosis	Actinic keratosis	99478.0	Diagnosis of Actinic keratosis
M222.00	Senile keratoma	Actinic keratosis	20567.0	Diagnosis of Actinic keratosis
M226.00	Solar keratosis	Actinic keratosis	1118.0	Diagnosis of Actinic keratosis
M226.11	Actinic keratosis	Actinic keratosis	2368.0	Diagnosis of Actinic keratosis

C940/3019 Actinic keratosis - Primary care - Med codes

Rows: 4

Code	Description	Disease	ReadcodeDescr	Readcode
1118.0	Diagnosis of Actinic keratosis	Actinic keratosis	Solar keratosis	M226.00
20567.0	Diagnosis of Actinic keratosis	Actinic keratosis	Senile keratoma	M222.00
2368.0	Diagnosis of Actinic keratosis	Actinic keratosis	Actinic keratosis	M226.11
99478.0	Diagnosis of Actinic keratosis	Actinic keratosis	Cryotherapy to actinic keratosis	7G09800

C941/3021 Actinic keratosis - Secondary care - Diagnoses - ICD10 codes

Rows: 1

Code	Description	Disease	Category
L57.0	Actinic keratosis	Actinic keratosis	Diagnosis of Actinic keratosis

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH92/version/184/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH92/version/184/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH92', '184', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH92/version/184/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH92/version/184/export/codes/?format=json
CSV	site_root/phenotypes/PH92/version/184/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH92', '184', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
184	Actinic keratosis	ieuan.scanlon	2021-10-06	currently shown