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CCU000 Deep Vein Thrombosis (dvt)

Angela Wood, Rachel Denholm, Sam Hollings, Jennifer Cooper, Samantha Ip, Venexia Walker, Spiros Denaxas, Ashley Akbari, Amitava Banerjee, William Whiteley, Alvina Lai, Jonathan Sterne, Cathie Sudlow, CVD-COVID-UK consortium

Type
Disease or Syndrome
ID
PH944
Version ID
2122
Data Sources
GPES Data for Pandemic Planning and Research (COVID-19) , Hospital Episode Statistics Admitted Patient Care , Civil Registration - Deaths , Trusted Research Environments for CVD-COVID-UK / COVID-IMPACT , Secondary Uses Services Payment By Results
Valid event data range
31/01/2020 - 31/10/2020
Sex
Female, Male
Agreement Date
29-03-2020
Coding system
ICD10 codes
Tags /Collections
BHF Data Science Centre Phenotype Library

Definition

Publications

  • Angela Wood, Rachel Denholm, Sam Hollings, Jennifer Cooper, Samantha Ip,Venexia Walker, Spiros Denaxas, Ashley Akbari, Amitava Banerjee, William Whiteley, Alvina Lai, Jonathan Sterne, Cathie Sudlow, CVD-COVID-UK consortium. Linked electronic health records for research on a nationwide cohort of more than 54 million people in England data resource BMJ 2021; 373 :n826 doi:10.1136/bmj.n826 https://www.bmj.com/content/373/bmj.n826

Clinical Code List

Rows: 11
Code Description type
I80.1 Phlebitis and thrombophlebitis of femoral vein 1
I80.2 Phlebitis and thrombophlebitis of other deep vessels of lower extremities 1
I81 Portal vein thrombosis 1
I82.0 Budd-Chiari syndrome 1
I82.2 Embolism and thrombosis of vena cava 1
I82.3 Embolism and thrombosis of renal vein 1
I82.8 Embolism and thrombosis of other specified veins 1
I82.9 Embolism and thrombosis of unspecified vein 1
O08.2 Embolism following abortion and ectopic and molar pregnancy 1
O22.3 Deep phlebothrombosis in pregnancy 1
O87.1 Deep phlebothrombosis in the puerperium 1

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH944/version/2122/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH944/version/2122/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH944', '2122', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH944/version/2122/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH944/version/2122/export/codes/?format=json
CSV site_root/phenotypes/PH944/version/2122/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH944', '2122', api_client=client)

Version History

Version
ID
Name Owner Publish date
2122 CCU000 Deep Vein Thrombosis (dvt) ieuan.scanlon 2022-05-17 currently shown
1967 CCU000 Deep Vein Thrombosis (dvt) ieuan.scanlon 2022-05-09

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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