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CCU002_01 Cardiomyopathy

Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne

ID
PH961
Version ID
2139
Type
Disease or Syndrome
Valid event data range
01/01/1997 - 07/12/2020
Sex
♀  Female ♂  Male
Agreement Date
2021-11-24
Coding system
Read codes v2 ICD10 codes SNOMED CT codes
Collections
BHF Data Science Centre Phenotype Library
Tags
No tags

Definition

Publications

  • Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne, for the CVD-COVID-UK/COVID-IMPACT consortium and th

Clinical Code List

Rows: 9
Code Description terminology code_type
I25.5 Ischaemic cardiomyopathy ICD10 1
I42.0 Dilated cardiomyopathy ICD10 1
I42.3 Endomyocardial (eosinophilic) disease ICD10 1
I42.5 Other restrictive cardiomyopathy ICD10 1
I42.7 Cardiomyopathy due to drugs and other external agents ICD10 1
I42.8 Other cardiomyopathies ICD10 1
I42.9 Cardiomyopathy, unspecified ICD10 1
I43 Cardiomyopathy in diseases classified elsewhere ICD10 1
O90.3 Cardiomyopathy in the puerperium ICD10 1
Rows: 3
Code Description terminology code_type
1321241000000105 Cardiomyopathy caused by severe acute respiratory syndrome coronavirus 2 (disorder) SNOMEDCT 1
240072005 Benign scapuloperoneal muscular dystrophy with cardiomyopathy (disorder) SNOMEDCT 1
240077004 Severe scapuloperoneal muscular dystrophy with cardiomyopathy (disorder) SNOMEDCT 1
Rows: 31
Code Description Category Phenotype
C3733 Familial cardiac amyloid Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
C373G Senile cardiac amyloidosis Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
F391B Cardiomyopathy in Duchenne muscular dystrophy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G343. Ischaemic cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G55.. Cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G550. Endomyocardial fibrosis Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G552. Obscure African cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G554. Other primary cardiomyopathies Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5541 Constrictive cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5542 Familial cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5545 Takotsubo cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G554z Other primary cardiomyopathy NOS Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G557. Nutritional and metabolic cardiomyopathies Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5570 Amyloid heart disease Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5571 Beriberi heart disease Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5575 Thyrotoxic heart disease Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G557z Nutritional and metabolic cardiomyopathy NOS Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G558. Cardiomyopathy in disease EC Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5580 Cardiomyopathy in Friedreich's ataxia Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5581 Cardiomyopathy in myotonic dystrophy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5582 Dystrophic cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G5584 Amyloid cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G558z Cardiomyopathy in diseases EC, NOS Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G559. Arrhythmogenic right ventricular cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G55A. Tachycardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G55y. Secondary cardiomyopathy NOS Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G55y0 Cardiomyopathy due to drugs and other external agents Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
G55z. Cardiomyopathy NOS Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
Gyu5N [X]Other restrictive cardiomyopathy Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
Gyu5P [X]Other cardiomyopathies Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY
Gyu5R [X]Cardiomyopathy in metabolic diseases CE Diagnosis of Other Cardiomyopathy CARDIOMYOPATHY

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH961/version/2139/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH961/version/2139/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH961', '2139', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH961/version/2139/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH961/version/2139/export/codes/?format=json
CSV site_root/phenotypes/PH961/version/2139/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH961', '2139', api_client=client)

Version History

Version
ID
Name Owner Publish date
2139 CCU002_01 Cardiomyopathy ieuan.scanlon 2022-05-17 currently shown
2001 CCU002_01 Cardiomyopathy ieuan.scanlon 2022-05-09

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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