Phenotype Library | phenotype: CCU002

CCU002_01 Depression

Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne

PH964

Version ID

2142

Type

Disease or Syndrome

Data Sources

GPES Data for Pandemic Planning and Research (COVID-19) , Hospital Episode Statistics Admitted Patient Care , Covid-19 Second Generation Surveillance System , Civil Registration - Deaths , Trusted Research Environments for CVD-COVID-UK / COVID-IMPACT , COVID-19 Test Results (PATD) , Welsh Longitudinal GP Dataset - Welsh Primary Care (WLGP) , Patient Episode Dataset for Wales (PEDW) , Secondary Uses Services Payment By Results

Valid event data range

01/01/1997 - 07/12/2020

Sex

♀ Female ♂ Male

Agreement Date

2021-11-24

Coding system

Read codes v2 ICD10 codes SNOMED CT codes

Collections

BHF Data Science Centre Phenotype Library

Definition

Publications

Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne, for the CVD-COVID-UK/COVID-IMPACT consortium and th

Clinical Code List

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C2778/7299 CCU002_01 Depression - Phenotypes - England hospitalization EHR: Depression diagnosis - ICD10 codes

Rows: 2

Code	Description	terminology	code_type
F32	Depressive episode	ICD10	1
F33	Recurrent depressive disorder	ICD10	1

C2779/7300 CCU002_01 Depression - Phenotypes - England primary care EHR: Depression diagnosis - SNOMED CT codes

Rows: 67

Code	Description	terminology	code_type
1086471000000103	Recurrent reactive depressive episodes, severe, with psychosis (disorder)	SNOMEDCT	1
1086661000000108	Reactive depression, prolonged single episode (disorder)	SNOMEDCT	1
1089511000000100	Recurrent depression with current severe episode and psychotic features (disorder)	SNOMEDCT	1
1089631000000109	Recurrent depression with current severe episode without psychotic features (disorder)	SNOMEDCT	1
1089641000000100	Recurrent depression with current moderate episode (disorder)	SNOMEDCT	1
15639000	Moderate major depression, single episode (disorder)	SNOMEDCT	1
16264621000119109	Recurrent mild major depressive disorder co-occurrent with anxiety (disorder)	SNOMEDCT	1
16264901000119109	Recurrent moderate major depressive disorder co-occurrent with anxiety (disorder)	SNOMEDCT	1
16265951000119109	Mild major depressive disorder co-occurrent with anxiety single episode (disorder)	SNOMEDCT	1
16266831000119100	Moderate major depressive disorder co-occurrent with anxiety single episode (disorder)	SNOMEDCT	1
18818009	Moderate recurrent major depression (disorder)	SNOMEDCT	1
191455000	Presenile dementia with depression (disorder)	SNOMEDCT	1
191459006	Senile dementia with depression (disorder)	SNOMEDCT	1
191601008	Single major depressive episode, mild (disorder)	SNOMEDCT	1
191604000	Single major depressive episode, severe, with psychosis (disorder)	SNOMEDCT	1
191610000	Recurrent major depressive episodes, mild (disorder)	SNOMEDCT	1
191611001	Recurrent major depressive episodes, moderate (disorder)	SNOMEDCT	1
191613003	Recurrent major depressive episodes, severe, with psychosis (disorder)	SNOMEDCT	1
191616006	Recurrent depression (disorder)	SNOMEDCT	1
191659001	Atypical depressive disorder (disorder)	SNOMEDCT	1
191676002	Reactive depressive psychosis (disorder)	SNOMEDCT	1
192049004	Prolonged depressive adjustment reaction (disorder)	SNOMEDCT	1
192080009	Chronic depression (disorder)	SNOMEDCT	1
19527009	Single episode of major depression in full remission (disorder)	SNOMEDCT	1
231485007	Post-schizophrenic depression (disorder)	SNOMEDCT	1
231499006	Endogenous depression first episode (disorder)	SNOMEDCT	1
231500002	Masked depression (disorder)	SNOMEDCT	1
231504006	Mixed anxiety and depressive disorder (disorder)	SNOMEDCT	1
247803002	Seasonal affective disorder (disorder)	SNOMEDCT	1
251000119105	Severe major depression, single episode (disorder)	SNOMEDCT	1
25922000	Major depressive disorder, single episode with postpartum onset (disorder)	SNOMEDCT	1
268621008	Recurrent major depressive episodes (disorder)	SNOMEDCT	1
274948002	Endogenous depression - recurrent (disorder)	SNOMEDCT	1
28475009	Severe recurrent major depression with psychotic features (disorder)	SNOMEDCT	1
300706003	Endogenous depression (disorder)	SNOMEDCT	1
310495003	Mild depression (disorder)	SNOMEDCT	1
310496002	Moderate depression (disorder)	SNOMEDCT	1
310497006	Severe depression (disorder)	SNOMEDCT	1
35489007	Depressive disorder (disorder)	SNOMEDCT	1
357705009	Cotard's syndrome (disorder)	SNOMEDCT	1
36474008	Severe recurrent major depression without psychotic features (disorder)	SNOMEDCT	1
36923009	Major depression, single episode (disorder)	SNOMEDCT	1
370143000	Major depressive disorder (disorder)	SNOMEDCT	1
397701000000102	[X]Severe depressive episode without psychotic symptoms (disorder)	SNOMEDCT	1
397711000000100	[X]Severe depressive episode with psychotic symptoms (disorder)	SNOMEDCT	1
40379007	Mild recurrent major depression (disorder)	SNOMEDCT	1
40568001	Recurrent brief depressive disorder (disorder)	SNOMEDCT	1
430421000000104	[X]Mild depressive episode (disorder)	SNOMEDCT	1
465441000000108	[X]Moderate depressive episode (disorder)	SNOMEDCT	1
698957003	Depressive disorder in remission (disorder)	SNOMEDCT	1
70747007	Major depression single episode, in partial remission (disorder)	SNOMEDCT	1
720453001	Moderately severe major depression single episode (disorder)	SNOMEDCT	1
73867007	Severe major depression with psychotic features (disorder)	SNOMEDCT	1
75084000	Severe major depression without psychotic features (disorder)	SNOMEDCT	1
755321000000106	Single major depressive episode, severe, with psychosis, psychosis in remission (disorder)	SNOMEDCT	1
755331000000108	Recurrent major depressive episodes, severe, with psychosis, psychosis in remission (disorder)	SNOMEDCT	1
76441001	Severe major depression, single episode, without psychotic features (disorder)	SNOMEDCT	1
764611000000100	Recurrent major depressive episodes, severe (disorder)	SNOMEDCT	1
764691000000109	Recurrent major depressive episodes, in partial remission (disorder)	SNOMEDCT	1
765176007	Psychosis and severe depression co-occurrent and due to bipolar affective disorder (disorder)	SNOMEDCT	1
78667006	Dysthymia (disorder)	SNOMEDCT	1
79298009	Mild major depression, single episode (disorder)	SNOMEDCT	1
832007	Moderate major depression (disorder)	SNOMEDCT	1
83458005	Agitated depression (disorder)	SNOMEDCT	1
84760002	Schizoaffective disorder, depressive type (disorder)	SNOMEDCT	1
87414006	Reactive depression (situational) (disorder)	SNOMEDCT	1
87512008	Mild major depression (disorder)	SNOMEDCT	1

C2780/7301 CCU002_01 Depression - Phenotypes - Wales primary care EHR: Depression diagnosis - Read codes v2

Rows: 75

Code	Description	Category	Phenotype
1465	H/O: depression	History of Depression	DEPRESSION
212S.	Depression resolved	History of Depression	DEPRESSION
8BK0.	Depression management programme	History of Depression	DEPRESSION
8CAa.	Patient given advice about management of depression	History of Depression	DEPRESSION
8HHq.	Referral for guided self-help for depression	History of Depression	DEPRESSION
9H90.	Depression annual review	History of Depression	DEPRESSION
9H91.	Depression medication review	History of Depression	DEPRESSION
9H92.	Depression interim review	History of Depression	DEPRESSION
9HA0.	On depression register	History of Depression	DEPRESSION
9Ov..	Depression monitoring administration	History of Depression	DEPRESSION
9Ov0.	Depression monitoring first letter	History of Depression	DEPRESSION
9Ov1.	Depression monitoring second letter	History of Depression	DEPRESSION
9Ov2.	Depression monitoring third letter	History of Depression	DEPRESSION
9Ov3.	Depression monitoring verbal invite	History of Depression	DEPRESSION
9Ov4.	Depression monitoring telephone invite	History of Depression	DEPRESSION
9k4..	Depression - enhanced services administration	History of Depression	DEPRESSION
9k40.	Depression - enhanced service completed	History of Depression	DEPRESSION
9kQ..	On full dose long term treatment depression - enh serv admin	History of Depression	DEPRESSION
E0013	Presenile dementia with depression	Diagnosis of Depression	DEPRESSION
E0021	Senile dementia with depression	Diagnosis of Depression	DEPRESSION
E0043	Arteriosclerotic dementia with depression	Diagnosis of Depression	DEPRESSION
E112.	Single major depressive episode	Diagnosis of Depression	DEPRESSION
E1120	Single major depressive episode, unspecified	Diagnosis of Depression	DEPRESSION
E1121	Single major depressive episode, mild	Diagnosis of Depression	DEPRESSION
E1122	Single major depressive episode, moderate	Diagnosis of Depression	DEPRESSION
E1123	Single major depressive episode, severe, without psychosis	Diagnosis of Depression	DEPRESSION
E1124	Single major depressive episode, severe, with psychosis	Diagnosis of Depression	DEPRESSION
E1125	Single major depressive episode, partial or unspec remission	Diagnosis of Depression	DEPRESSION
E1126	Single major depressive episode, in full remission	History of Depression	DEPRESSION
E112z	Single major depressive episode NOS	Diagnosis of Depression	DEPRESSION
E113.	Recurrent major depressive episode	Diagnosis of Depression	DEPRESSION
E1130	Recurrent major depressive episodes, unspecified	Diagnosis of Depression	DEPRESSION
E1131	Recurrent major depressive episodes, mild	Diagnosis of Depression	DEPRESSION
E1132	Recurrent major depressive episodes, moderate	Diagnosis of Depression	DEPRESSION
E1133	Recurrent major depressive episodes, severe, no psychosis	Diagnosis of Depression	DEPRESSION
E1134	Recurrent major depressive episodes, severe, with psychosis	Diagnosis of Depression	DEPRESSION
E1135	Recurrent major depressive episodes,partial/unspec remission	Diagnosis of Depression	DEPRESSION
E1136	Recurrent major depressive episodes, in full remission	History of Depression	DEPRESSION
E1137	Recurrent depression	Diagnosis of Depression	DEPRESSION
E113z	Recurrent major depressive episode NOS	Diagnosis of Depression	DEPRESSION
E118.	Seasonal affective disorder	Diagnosis of Depression	DEPRESSION
E11y2	Atypical depressive disorder	Diagnosis of Depression	DEPRESSION
E11z2	Masked depression	Diagnosis of Depression	DEPRESSION
E130.	Reactive depressive psychosis	Diagnosis of Depression	DEPRESSION
E135.	Agitated depression	Diagnosis of Depression	DEPRESSION
E2003	Anxiety with depression	Diagnosis of Depression	DEPRESSION
E291.	Prolonged depressive reaction	Diagnosis of Depression	DEPRESSION
E2B..	Depressive disorder NEC	Diagnosis of Depression	DEPRESSION
E2B1.	Chronic depression	Diagnosis of Depression	DEPRESSION
Eu204	[X]Post-schizophrenic depression	Diagnosis of Depression	DEPRESSION
Eu251	[X]Schizoaffective disorder, depressive type	Diagnosis of Depression	DEPRESSION
Eu32.	[X]Depressive episode	Diagnosis of Depression	DEPRESSION
Eu320	[X]Mild depressive episode	Diagnosis of Depression	DEPRESSION
Eu321	[X]Moderate depressive episode	Diagnosis of Depression	DEPRESSION
Eu322	[X]Severe depressive episode without psychotic symptoms	Diagnosis of Depression	DEPRESSION
Eu323	[X]Severe depressive episode with psychotic symptoms	Diagnosis of Depression	DEPRESSION
Eu324	[X]Mild depression	Diagnosis of Depression	DEPRESSION
Eu325	[X]Major depression, mild	Diagnosis of Depression	DEPRESSION
Eu326	[X]Major depression, moderately severe	Diagnosis of Depression	DEPRESSION
Eu327	[X]Major depression, severe without psychotic symptoms	Diagnosis of Depression	DEPRESSION
Eu328	[X]Major depression, severe with psychotic symptoms	Diagnosis of Depression	DEPRESSION
Eu329	[X]Single major depr ep, severe with psych, psych in remiss	History of Depression	DEPRESSION
Eu32A	[X]Recurr major depr ep, severe with psych, psych in remiss	History of Depression	DEPRESSION
Eu32y	[X]Other depressive episodes	Diagnosis of Depression	DEPRESSION
Eu32z	[X]Depressive episode, unspecified	Diagnosis of Depression	DEPRESSION
Eu33.	[X]Recurrent depressive disorder	Diagnosis of Depression	DEPRESSION
Eu330	[X]Recurrent depressive disorder, current episode mild	Diagnosis of Depression	DEPRESSION
Eu331	[X]Recurrent depressive disorder, current episode moderate	Diagnosis of Depression	DEPRESSION
Eu332	[X]Recurr depress disorder cur epi severe without psyc sympt	Diagnosis of Depression	DEPRESSION
Eu333	[X]Recurrent depress disorder cur epi severe with psyc symp	Diagnosis of Depression	DEPRESSION
Eu334	[X]Recurrent depressive disorder, currently in remission	History of Depression	DEPRESSION
Eu33y	[X]Other recurrent depressive disorders	Diagnosis of Depression	DEPRESSION
Eu33z	[X]Recurrent depressive disorder, unspecified	Diagnosis of Depression	DEPRESSION
Eu341	[X]Dysthymia	Diagnosis of Depression	DEPRESSION
Eu412	[X]Mixed anxiety and depressive disorder	Diagnosis of Depression	DEPRESSION

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH964/version/2142/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH964/version/2142/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH964', '2142', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH964/version/2142/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH964/version/2142/export/codes/?format=json
CSV	site_root/phenotypes/PH964/version/2142/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH964', '2142', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
2142	CCU002_01 Depression	ieuan.scanlon	2022-05-17	currently shown
2007	CCU002_01 Depression	ieuan.scanlon	2022-05-09