Phenotypes > CCU002_01 Deep vein thrombosis, intracranial venous thrombosis

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CCU002_01 Deep vein thrombosis, intracranial venous thrombosis

Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne

Type
Disease or Syndrome
ID
PH966
Version ID
2144
Data Sources
GPES Data for Pandemic Planning and Research (COVID-19) , Hospital Episode Statistics Admitted Patient Care , Civil Registration - Deaths , Covid-19 Second Generation Surveillance System , Trusted Research Environments for CVD-COVID-UK / COVID-IMPACT , Secondary Uses Services Payment By Results , COVID-19 Test Results (PATD) , Patient Episode Dataset for Wales (PEDW) , Welsh Longitudinal GP Dataset - Welsh Primary Care (WLGP)
Valid event data range
01/01/1997 - 07/12/2020
Sex
Female, Male
Agreement Date
2021-11-24
Coding system
Read codes v2 ICD10 codes SNOMED CT codes
Tags /Collections
BHF Data Science Centre Phenotype Library

Definition

Publications

  • Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne, for the CVD-COVID-UK/COVID-IMPACT consortium and th

Clinical Code List

Expand All  /  Collapse All
Rows: 1
Code Description terminology code_type
I80 Phlebitis and thrombophlebitis ICD10 1
Rows: 3
Code Description terminology code_type
G08 Intracranial venous thrombosis ICD10 1
I63.6 Intracranial venous thrombosis ICD10 1
I67.6 Intracranial venous thrombosis ICD10 1
Rows: 1
Code Description terminology code_type
195230003 Cerebral infarction due to cerebral venous thrombosis, nonpyogenic SNOMEDCT 1
Rows: 4
Code Description terminology code_type
O22.3 Thrombosis during pregnancy and puerperium ICD10 1
O87.1 Thrombosis during pregnancy and puerperium ICD10 1
O87.9 Thrombosis during pregnancy and puerperium ICD10 1
O88.2 Thrombosis during pregnancy and puerperium ICD10 1
Rows: 2
Code Description terminology code_type
O22.5 ntracranial venous thrombosis in pregnancy and puerperium ICD10 1
O87.3 ntracranial venous thrombosis in pregnancy and puerperium ICD10 1
Rows: 5
Code Description terminology code_type
I82.0 Other vein thrombosis ICD10 1
I82.2 Other vein thrombosis ICD10 1
I82.3 Other vein thrombosis ICD10 1
I82.8 Other vein thrombosis ICD10 1
I82.9 Other vein thrombosis ICD10 1
Rows: 1
Code Description terminology code_type
O08.2 Embolism following abortion and ectopic and molar pregnancy ICD10 1
Rows: 1
Code Description Phenotype
G6760 DVT_ICVT

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH966/version/2144/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH966/version/2144/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH966', '2144', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH966/version/2144/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH966/version/2144/export/codes/?format=json
CSV site_root/phenotypes/PH966/version/2144/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH966', '2144', api_client=client)

Version History

Version
ID		 Name Owner Publish date
2144 CCU002_01 Deep vein thrombosis, intracranial venous thrombosis ieuan.scanlon 2022-05-17 currently shown
2011 CCU002_01 Deep vein thrombosis, intracranial venous thrombosis ieuan.scanlon 2022-05-09

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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