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Anal fissure

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH97
Version ID
194
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes OPCS4 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Anal fissure' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Anal fissure' diagnosis or history of diagnosis or procedure during a consultation

OR Secondary care

  1. ALL diagnoses of 'Anal fissure' or history of diagnosis during a hospitalization OR Secondary care (OPCS4)

  2. ALL procedures for 'Anal fissure' during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 8
Code Description Disease Medcode Category
7739300.0 Excision of anal fissure Anal fissure 1089.0 Procedure for Anal fissure
J53..00 Anal fissure and fistula Anal fissure 1979.0 Diagnosis of Anal fissure
J530.00 Anal fissure Anal fissure 928.0 Diagnosis of Anal fissure
J530.11 Tear of anus - non-traumatic Anal fissure 12665.0 Diagnosis of Anal fissure
J530000 Acute anal fissure Anal fissure 10905.0 Diagnosis of Anal fissure
J530100 Chronic anal fissure Anal fissure 18337.0 Diagnosis of Anal fissure
J53z.00 Anal fissure and fistula NOS Anal fissure 15210.0 Diagnosis of Anal fissure
J544.00 Ano-rectal fissure abscess Anal fissure 62790.0 Diagnosis of Anal fissure
Rows: 8
Code Description Disease ReadcodeDescr Readcode
1089.0 Procedure for Anal fissure Anal fissure Excision of anal fissure 7739300.0
10905.0 Diagnosis of Anal fissure Anal fissure Acute anal fissure J530000
12665.0 Diagnosis of Anal fissure Anal fissure Tear of anus - non-traumatic J530.11
15210.0 Diagnosis of Anal fissure Anal fissure Anal fissure and fistula NOS J53z.00
18337.0 Diagnosis of Anal fissure Anal fissure Chronic anal fissure J530100
1979.0 Diagnosis of Anal fissure Anal fissure Anal fissure and fistula J53..00
62790.0 Diagnosis of Anal fissure Anal fissure Ano-rectal fissure abscess J544.00
928.0 Diagnosis of Anal fissure Anal fissure Anal fissure J530.00
Rows: 3
Code Description Disease Category
K60.0 Acute anal fissure Anal fissure Diagnosis of Anal fissure
K60.1 Chronic anal fissure Anal fissure Diagnosis of Anal fissure
K60.2 Anal fissure, unspecified Anal fissure Diagnosis of Anal fissure
Rows: 1
Code Description Disease Category
H56.4 Excision of anal fissure Anal fissure Procedure for Anal fissure

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH97/version/194/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH97/version/194/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH97', '194', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH97/version/194/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH97/version/194/export/codes/?format=json
CSV site_root/phenotypes/PH97/version/194/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH97', '194', api_client=client)

Version History

Version
ID
Name Owner Publish date
194 Anal fissure ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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