Phenotype Library | phenotype: CCU002

CCU002_01 Myocarditis

Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne

PH975

Version ID

2153

Type

Disease or Syndrome

Data Sources

GPES Data for Pandemic Planning and Research (COVID-19) , Hospital Episode Statistics Admitted Patient Care , Covid-19 Second Generation Surveillance System , Civil Registration - Deaths , Trusted Research Environments for CVD-COVID-UK / COVID-IMPACT , Secondary Uses Services Payment By Results

Valid event data range

01/01/1997 - 07/12/2020

Sex

♀ Female ♂ Male

Agreement Date

2021-11-24

Coding system

ICD10 codes

Collections

BHF Data Science Centre Phenotype Library

Definition

Publications

Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne, for the CVD-COVID-UK/COVID-IMPACT consortium and th

Clinical Code List

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JSON

XML

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C2807/7328 CCU002_01 Myocarditis - Phenotypes - England hospitalization EHR: Myocarditis - ICD10 codes

Rows: 3

Code	Description	terminology
I40	Acute myocarditis	ICD10
I41	Myocarditis in diseases classified elsewhere	ICD10
I51.4	Myocarditis, unspecified	ICD10

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH975/version/2153/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH975/version/2153/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH975', '2153', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH975/version/2153/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH975/version/2153/export/codes/?format=json
CSV	site_root/phenotypes/PH975/version/2153/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH975', '2153', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
2153	CCU002_01 Myocarditis	ieuan.scanlon	2022-05-17	currently shown
2029	CCU002_01 Myocarditis	ieuan.scanlon	2022-05-09