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CCU002_01 Thrombocytopenia

Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne

Type
Disease or Syndrome
ID
PH984
Version ID
2162
Data Sources
GPES Data for Pandemic Planning and Research (COVID-19) , Hospital Episode Statistics Admitted Patient Care , Civil Registration - Deaths , Covid-19 Second Generation Surveillance System , Trusted Research Environments for CVD-COVID-UK / COVID-IMPACT , Secondary Uses Services Payment By Results , COVID-19 Test Results (PATD) , Patient Episode Dataset for Wales (PEDW) , Welsh Longitudinal GP Dataset - Welsh Primary Care (WLGP)
Valid event data range
01/01/1997 - 07/12/2020
Sex
Female, Male
Agreement Date
2021-11-24
Coding system
Read codes v2 ICD10 codes SNOMED CT codes
Tags /Collections
BHF Data Science Centre Phenotype Library

Definition

Publications

  • Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne, for the CVD-COVID-UK/COVID-IMPACT consortium and th

Clinical Code List

Rows: 4
Code Description terminology code_type
D69.3 Thrombocytopenia ICD10 1
D69.4 Thrombocytopenia ICD10 1
D69.5 Thrombocytopenia ICD10 1
D69.6 Thrombocytopenia ICD10 1
Rows: 33
Code Description terminology code_type
111588002 Heparin associated thrombotic thrombocytopenia SNOMEDCT 1
128091003 Autoimmune thrombocytopenia SNOMEDCT 1
13172003 Autoimmune thrombocytopenic purpura SNOMEDCT 1
154826009 Secondary thrombocytopenia SNOMEDCT 1
191322006 Thrombocytopenia caused by drugs SNOMEDCT 1
191323001 Thrombocytopenia due to extracorporeal circulation of blood SNOMEDCT 1
19307009 Drug-induced immune thrombocytopenia SNOMEDCT 1
267534000 Primary thrombocytopenia SNOMEDCT 1
28505005 Acute idiopathic thrombocytopenic purpura SNOMEDCT 1
2897005 Immune thrombocytopenia SNOMEDCT 1
302873008 Thrombocytopenic purpura SNOMEDCT 1
32273002 Idiopathic thrombocytopenic purpura SNOMEDCT 1
33183004 Post infectious thrombocytopenic purpura SNOMEDCT 1
36070007 Immunodeficiency with thrombocytopenia AND eczema SNOMEDCT 1
371106008 Idiopathic maternal thrombocytopenia SNOMEDCT 1
402653004 Thrombocytopenic purpura due to defective platelet production SNOMEDCT 1
402654005 Thrombocytopenic purpura due to platelet consumption SNOMEDCT 1
417626001 Thrombocytopenic purpura associated with metabolic disorder SNOMEDCT 1
438476003 Autoimmune thrombotic thrombocytopenic purpura SNOMEDCT 1
438492008 Hereditary thrombocytopenic disorder SNOMEDCT 1
439007008 Acquired thrombotic thrombocytopenic purpura SNOMEDCT 1
441322009 Drug induced thrombotic thrombocytopenic purpura SNOMEDCT 1
441511006 History of immune thrombocytopenia SNOMEDCT 1
49341000119108 History of thrombocytopaenia SNOMEDCT 1
726769004 HIT (Heparin induced thrombocytopenia) antibody SNOMEDCT 1
73397007 Heparin induced thrombocytopaenia SNOMEDCT 1
74576004 Acquired thrombocytopenia SNOMEDCT 1
78129009 Thrombotic thrombocytopenic purpura SNOMEDCT 1
783251006 Hereditary thrombocytopenia with normal platelets SNOMEDCT 1
78345002 Thrombocytopenia due to diminished platelet production SNOMEDCT 1
82190001 Thrombocytopenia due to defective platelet production SNOMEDCT 1
866152006 Thrombocytopenia due to 2019 novel coronavirus SNOMEDCT 1
87902006 Thrombocytopenia due to non-immune destruction SNOMEDCT 1
Rows: 18
Code Description Category Phenotype
42P2. Auto-immune thrombocytopenia Primary or Idiopathic Thrombocytopaenia TCP
42P8. Heparin induced thrombocytopenia screening test Secondary or other Thrombocytopaenia TCP
C3912 Wiskott - Aldrich syndrome Secondary or other Thrombocytopaenia TCP
D313. Primary thrombocytopenia Primary or Idiopathic Thrombocytopaenia TCP
D3130 Idiopathic thrombocytopenic purpura Primary or Idiopathic Thrombocytopaenia TCP
D3131 Congenital thrombocytopenic purpura Primary or Idiopathic Thrombocytopaenia TCP
D3133 [X]Essential thrombocytopenia NOS Primary or Idiopathic Thrombocytopaenia TCP
D313y Other specified primary thrombocytopenia Primary or Idiopathic Thrombocytopaenia TCP
D313z Primary thrombocytopenia NOS Primary or Idiopathic Thrombocytopaenia TCP
D314. Secondary thrombocytopenia Secondary or other Thrombocytopaenia TCP
D3141 Thrombocytopenia due to drugs Secondary or other Thrombocytopaenia TCP
D3142 Thrombocytopenia due to extracorporeal circulation of blood Secondary or other Thrombocytopaenia TCP
D3143 Heparin-induced thrombocytopenia Secondary or other Thrombocytopaenia TCP
D314y Other specified secondary thrombocytopenia Secondary or other Thrombocytopaenia TCP
D314z Secondary thrombocytopenia NOS Secondary or other Thrombocytopaenia TCP
D315. Thrombocytopenia NOS Secondary or other Thrombocytopaenia TCP
Dyu32 [X]Other primary thrombocytopenia Primary or Idiopathic Thrombocytopaenia TCP
G7561 Thrombotic thrombocytopenic purpura Secondary or other Thrombocytopaenia TCP

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH984/version/2162/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH984/version/2162/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH984', '2162', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH984/version/2162/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH984/version/2162/export/codes/?format=json
CSV site_root/phenotypes/PH984/version/2162/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH984', '2162', api_client=client)

Version History

Version
ID
Name Owner Publish date
2162 CCU002_01 Thrombocytopenia ieuan.scanlon 2022-05-17 currently shown
2047 CCU002_01 Thrombocytopenia ieuan.scanlon 2022-05-09

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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